Function reference • SiPhyNetwork

All functions
`biconnectedComponents()`	Biconnected Components
`deleteTips()`	Remove tips from a phylogenetic Network
`getNetworkLevel()`	Get the level of a Network
`incompleteSampling()`	Sample Tips on a Phylogenetic Network
`isFUstable()`	Determine whether a phylogeny is FU-stable
`isNormal()`	#' Determine whether a phylogeny is Normal
`isTreeBased()`	Determine whether a network is tree-based
`isTreeChild()`	Determine whether a network is tree-child
`ltt.network()`	Lineages thru time on a network
`make.beta.draw()`	Function that makes a draw from a beta distribution
`make.categorical.draw()`	Function that makes a draw from a categorical distribution
`make.exp.decay()`	Make an exponential decay function
`make.linear.decay()`	Make a linear decay function
`make.polynomial.decay()`	Make a polynomial decay function
`make.stepwise()`	Make a stepwise decay function
`make.trait.model()`	Model for trait evolution across the phylogeny
`make.uniform.draw()`	Function that makes a draw from a uniform distribution
`network.gsa()`	Sample under the Generalized Sampling Approach
`plottable.net()`	Create a more Plotting-Friendly phylogenetic Network
`read.net()`	Read a Network from Parenthetic Format
`reconstructedNetwork()`	Remove Extinct Lineages from a Phylogenetic Network
`sim.bdh.age()`	Simulate a Phylogenetic Network to a Specified Number of Taxa
`sim.bdh.taxa.gsa()`	Simulate a Phylogenetic Network to a Specified Number of Taxa
`sim.bdh.taxa.ssa()`	Simulate a Phylogenetic Network to a Specified Number of Taxa
`write.net()`	Write a Network in Parenthetic Format

Reference

All functions